Aliases : AGL65
Description : MADS/AGL-type transcription factor & original description: none
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00262760 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Als_g11632 | AGL65 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.12G051800.1 | GL19, AGL19,... | MADS/AGL-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g20252 | AGL8, FUL | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g50123 | AGL3, SEP4 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Len_g59047 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19814 | AGL10, CAL1, CAL | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g02675 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29083 | ANR1, AGL44 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g54366 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo437868 | AGL29 | RNA biosynthesis.transcriptional activation.MADS box... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g16602 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g20318 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
| CC | GO:0030008 | TRAPP complex | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002100 | TF_MADSbox | 10 | 57 |
| No external refs found! |
