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  5. Aop_g16271

Aop_g16271


Description : not classified & original description: none


Gene families : OG0002601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002601_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g16271
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene19740.t1 Aspi01Gene19740 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G023300.1 Ceric.11G023300 not classified & original description: pacid=50596447... 0.03 OrthoFinder output from all 47 species
Ceric.11G023500.1 Ceric.11G023500 not classified & original description: pacid=50596865... 0.03 OrthoFinder output from all 47 species
Ceric.11G025800.1 Ceric.11G025800 not classified & original description: pacid=50595770... 0.02 OrthoFinder output from all 47 species
Dac_g40552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14271 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g61949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0182.g024901 No alias not classified & original description: CDS=1-489 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR008729 PA_de_COase 1 138
No external refs found!