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  5. Aop_g16336

Aop_g16336


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g16336

Target Alias Description ECC score Gene Family Method Actions
Adi_g004392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005655 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034905 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067278 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082696 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16587 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17033 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18613 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g22784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33357 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33723 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36543 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36547 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16000 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16738 No alias ssDNA-binding protein *(OSB) & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g22281 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g26368 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28412 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g21419 EMB2744 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29847 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G018600.1 Ceric.01G018600 not classified & original description: pacid=50592052... 0.03 OrthoFinder output from all 47 species
Ceric.20G015100.1 Ceric.20G015100 not classified & original description: pacid=50567311... 0.04 OrthoFinder output from all 47 species
Ceric.28G015100.1 Ceric.28G015100 not classified & original description: pacid=50570923... 0.04 OrthoFinder output from all 47 species
Dac_g04715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18257 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27446 CRR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g30484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g32529 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35972 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g02296 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g58100.1 OTP85, LOC_Os03g58100 RNA editing factor (OTP85) 0.04 OrthoFinder output from all 47 species
LOC_Os04g51350.1 LOC_Os04g51350 RNA editing factor (AEF1) 0.03 OrthoFinder output from all 47 species
Len_g04830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g55833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07069 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g14702 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g33833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16520 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17495 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g18006 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g30350 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31332 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57072 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63395 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004036 OTP84 not classified & original description: CDS=1-1773 0.02 OrthoFinder output from all 47 species
Spa_g04262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24048 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25989 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g27467 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44783 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45689 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56737 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56842 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30247 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 414 460
IPR002885 Pentatricopeptide_repeat 107 153
IPR002885 Pentatricopeptide_repeat 5 51
IPR002885 Pentatricopeptide_repeat 310 357
IPR002885 Pentatricopeptide_repeat 208 255
IPR032867 DYW_dom 633 718
IPR002885 Pentatricopeptide_repeat 285 308
IPR002885 Pentatricopeptide_repeat 81 103
IPR002885 Pentatricopeptide_repeat 488 507
No external refs found!