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  4. Sequence
  5. Aop_g16625

Aop_g16625


Description : not classified & original description: none


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g16625
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00271140 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00023p00192080 evm_27.TU.AmTr_v1... Chitinase 1 OS=Tulipa bakeri 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00192280 evm_27.TU.AmTr_v1... Chitinase 1 OS=Tulipa bakeri 0.05 OrthoFinder output from all 47 species
AMTR_s00071p00062800 evm_27.TU.AmTr_v1... Chitinase 2 OS=Tulipa bakeri 0.01 OrthoFinder output from all 47 species
Adi_g049053 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049054 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g051500 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g060075 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03907 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26521 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30349 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30357 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g32400 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g32401 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33127 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Als_g44113 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g44545 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Als_g50722 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21301 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12205 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37350 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01958.t1 Aspi01Gene01958 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene05703.t1 Aspi01Gene05703 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27606.t1 Aspi01Gene27606 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68849.t1 Aspi01Gene68849 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene68850.t1 Aspi01Gene68850 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene68852.t1 Aspi01Gene68852 2S globulin seed storage protein & original description: none 0.1 OrthoFinder output from all 47 species
Aspi01Gene68854.t1 Aspi01Gene68854 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.14G065600.1 Ceric.14G065600 2S globulin seed storage protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.14G066400.1 Ceric.14G066400 2S globulin seed storage protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G066600.1 Ceric.14G066600 2S globulin seed storage protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z042600.1 Ceric.1Z042600 2S globulin seed storage protein & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.1Z042900.1 Ceric.1Z042900 2S globulin seed storage protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z043300.1 Ceric.1Z043300 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z043400.1 Ceric.1Z043400 2S globulin seed storage protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z063200.1 Ceric.1Z063200 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z192800.1 Ceric.1Z192800 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z210700.1 Ceric.1Z210700 2S globulin seed storage protein & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.1Z210800.1 Ceric.1Z210800 2S globulin seed storage protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z224900.1 Ceric.1Z224900 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g07284 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28835 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34761 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g36690 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g29297 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g29930 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33452 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g09037 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g57390.1 LOC_Os01g57390 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g57400.1 LOC_Os01g57400 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g28050.1 LOC_Os10g28050 no description available(sp|q7m443|chit2_tulsb : 285.0) 0.03 OrthoFinder output from all 47 species
Len_g06424 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g43213 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Len_g46226 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Len_g48364 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g50580 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Len_g50581 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Len_g50689 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Len_g51292 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g11736 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06939 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15826 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30589 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30590 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32653 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g22062 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35593 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g39729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g49402 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13030 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021703 No alias 2S globulin seed storage protein & original description:... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021725 No alias 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Smo411181 No alias Chitinase 1 OS=Tulipa bakeri 0.02 OrthoFinder output from all 47 species
Solyc11g072760.1.1 Solyc11g072760 no description available(sp|q7m443|chit2_tulsb : 364.0) 0.02 OrthoFinder output from all 47 species
Spa_g46052 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48353 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10934 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18192 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36586 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e004770_P001 Zm00001e004770 no description available(sp|q7m443|chit2_tulsb : 315.0) 0.05 OrthoFinder output from all 47 species
Zm00001e015464_P001 Zm00001e015464 no description available(sp|q7m443|chit2_tulsb : 269.0) 0.02 OrthoFinder output from all 47 species
Zm00001e021310_P001 Zm00001e021310 no description available(sp|q7m443|chit2_tulsb : 281.0) 0.03 OrthoFinder output from all 47 species
Zm00001e028945_P001 Zm00001e028945 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 92 125
IPR018392 LysM_dom 32 74
No external refs found!