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  5. Aop_g16882

Aop_g16882


Description : component *(eL27) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000924 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000924_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g16882
Cluster HCCA: Cluster_305

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00176990 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT2G32220 No alias Ribosomal L27e protein family 0.04 OrthoFinder output from all 47 species
AT3G22230 No alias Ribosomal L27e protein family 0.04 OrthoFinder output from all 47 species
AT4G15000 No alias Ribosomal L27e protein family 0.05 OrthoFinder output from all 47 species
Adi_g088547 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g18759 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g21050 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Aop_g30907 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Aop_g33173 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021275.23 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Cre17.g701650 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g32145 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Gb_34700 No alias component RPL27 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Gb_36674 No alias component RPL27 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp4g23910.1 No alias component RPL27 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Msp_g18021 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g14343 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Sam_g30675 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g30677 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Smo166700 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc06g073300.1.1 Solyc06g073300 component RPL27 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Spa_g03073 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g24106 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g44975 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g43604 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR005824 KOW 7 32
IPR001141 Ribosomal_L27e 52 135
No external refs found!