Description : EC_5.2 cis-trans-isomerase & original description: none
Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g021138 | ROC3 | EC_5.2 cis-trans-isomerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g11199 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g63200 | ROC3 | EC_5.2 cis-trans-isomerase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g11313 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13234 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0011.g012462 | ATCYP20-2, CYP20-2 | EC_5.2 cis-trans-isomerase & original description: CDS=264-1001 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g08725 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G091900.1 | Ceric.01G091900 | EC_5.2 cis-trans-isomerase & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.21G017200.1 | Ceric.21G017200 | EC_5.2 cis-trans-isomerase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000217.29 | No alias | Protein modification.protein folding and quality... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000217.30 | ROC5, ATCYP1 | Protein modification.protein folding and quality... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g10578 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g08190.1 | LOC_Os07g08190 | protein folding catalyst | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g19382 | No alias | EC_5.2 cis-trans-isomerase & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEA | Interproscan |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140612 | DNA damage sensor activity | IEP | HCCA |
| MF | GO:0140664 | ATP-dependent DNA damage sensor activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002130 | Cyclophilin-type_PPIase_dom | 23 | 186 |
| No external refs found! |
