Aop_g17117

Description : component *(eL32) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001000_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g17117
Cluster	HCCA: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
Adi_g126879	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ala_g11788	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Ala_g32062	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ala_g37942	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Als_g31659	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Als_g59277	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g20751	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aop_g21319	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Cba_g76971	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cre06.g289550	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Dac_g04434	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dac_g17402	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Dac_g27003	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dac_g27058	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.09	OrthoFinder output from all 47 species
Dcu_g24494	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.09	OrthoFinder output from all 47 species
Ehy_g18228	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01005150001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
GSVIVT01021377001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Gb_36437	No alias	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
LOC_Os08g41300.1	LOC_Os08g41300	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Mp7g12480.1	No alias	component RPL32 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Msp_g02643	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g13764	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.09	OrthoFinder output from all 47 species
Pp3c14_10580V3.1	Pp3c14_10580	Ribosomal protein L32e	0.01	OrthoFinder output from all 47 species
Pp3c1_32490V3.1	Pp3c1_32490	Ribosomal protein L32e	0.02	OrthoFinder output from all 47 species
Ppi_g18612	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ppi_g20844	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ppi_g21271	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ppi_g47089	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Ppi_g52088	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Sam_g12910	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g30727	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sam_g30905	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Solyc02g070310.3.1	Solyc02g070310	component RPL32 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Solyc08g006900.3.1	Solyc08g006900	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Spa_g17123	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Spa_g36775	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Tin_g17904	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Zm00001e034604_P001	Zm00001e034604	component RPL32 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Zm00001e034606_P001	Zm00001e034606	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006448	regulation of translational elongation	IEP	HCCA
BP	GO:0006449	regulation of translational termination	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010628	positive regulation of gene expression	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0034250	positive regulation of amide metabolic process	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0043022	ribosome binding	IEP	HCCA
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0045727	positive regulation of translation	IEP	HCCA
BP	GO:0045901	positive regulation of translational elongation	IEP	HCCA
BP	GO:0045905	positive regulation of translational termination	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051247	positive regulation of protein metabolic process	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001515	Ribosomal_L32e	15	122

External Links

No external refs found!

Aop_g17117

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation