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  5. Lfl_g10347

Lfl_g10347


Description : endomembrane trafficking ATG6-stability regulator protein *(TRAF1) & original description: none


Gene families : OG0003009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003009_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g10347

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00232980 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.03 OrthoFinder output from all 47 species
Adi_g067633 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
Adi_g071882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15167 No alias endomembrane trafficking ATG6-stability regulator... 0.02 OrthoFinder output from all 47 species
Aev_g48943 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
Aob_g16175 No alias endomembrane trafficking ATG6-stability regulator... 0.02 OrthoFinder output from all 47 species
Cba_g21614 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
Ehy_g07893 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
LOC_Os12g40520.1 LOC_Os12g40520 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 OrthoFinder output from all 47 species
Mp8g14880.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 OrthoFinder output from all 47 species
Msp_g15370 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
Nbi_g17444 No alias endomembrane trafficking ATG6-stability regulator... 0.02 OrthoFinder output from all 47 species
Pir_g46286 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
Sam_g08395 No alias endomembrane trafficking ATG6-stability regulator... 0.03 OrthoFinder output from all 47 species
Solyc06g053750.3.1 Solyc06g053750 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 OrthoFinder output from all 47 species
Solyc09g089560.4.1 Solyc09g089560 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 OrthoFinder output from all 47 species
Zm00001e003140_P001 Zm00001e003140 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 OrthoFinder output from all 47 species
Zm00001e027387_P004 Zm00001e027387 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 78 195
No external refs found!