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  5. Aop_g17444

Aop_g17444


Description : transcriptional co-regulator *(OFP) & original description: none


Gene families : OG0000209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g17444

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00212750 OFP2, ATOFP2,... RNA biosynthesis.transcriptional activation.OFP... 0.03 OrthoFinder output from all 47 species
AMTR_s00027p00241200 ATOFP5, OFP5,... RNA biosynthesis.transcriptional activation.OFP... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00189070 OFP12, ATOFP12,... RNA biosynthesis.transcriptional activation.OFP... 0.03 OrthoFinder output from all 47 species
AT5G58360 ATOFP3, OFP3 ovate family protein 3 0.05 OrthoFinder output from all 47 species
Als_g15600 OFP8, ATOFP8 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g48830.1 ATOFP3, OFP3,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os05g36990.1 ATOFP7, OFP7,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os11g05780.1 LOC_Os11g05780 transcription factor (OFP) 0.04 OrthoFinder output from all 47 species
MA_23257g0010 OFP4, ATOFP4 transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
MA_31710g0010 ATOFP3, OFP3 transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Pnu_g16660 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022132 ATOFP10, OFP10 transcriptional co-regulator *(OFP) & original... 0.04 OrthoFinder output from all 47 species
Solyc02g072030.1.1 ATOFP5, OFP5,... transcription factor (OFP) 0.04 OrthoFinder output from all 47 species
Tin_g32323 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38119 No alias transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e041973_P001 ATOFP13, OFP13,... transcription factor (OFP) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006458 Ovate_C 311 367
No external refs found!