Aop_g17928


Description : not classified & original description: none


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g17928

Target Alias Description ECC score Gene Family Method Actions
Als_g03168 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.1Z316000.1 Ceric.1Z316000 not classified & original description: pacid=50597213... 0.03 OrthoFinder output from all 47 species
Dac_g02813 No alias chromatin-silencing modulator (ALP1) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Dcu_g04744 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g01200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_8870252g0010 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g13144 No alias chromatin-silencing modulator (ALP1) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Nbi_g15840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018199 peptidyl-glutamine modification IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 265 429
No external refs found!