Description : component *(PsbW) of PS-II complex & original description: none
Gene families : OG0002050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002050_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g19325 | |
| Cluster | HCCA: Cluster_278 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g35787 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene42600.t1 | PSBW, Aspi01Gene42600 | component *(PsbW) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene48046.t1 | PSBW, Aspi01Gene48046 | component *(PsbW) of PS-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g31817 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.06G036500.1 | PSBW, Ceric.06G036500 | component *(PsbW) of PS-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.32G066400.1 | PSBW, Ceric.32G066400 | component *(PsbW) of PS-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g09117 | No alias | component *(PsbW) of PS-II complex & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Lfl_g19670 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Lfl_g19837 | No alias | component *(PsbW) of PS-II complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g33298 | No alias | component *(PsbW) of PS-II complex & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Ppi_g09459 | No alias | component *(PsbW) of PS-II complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g25239 | No alias | component *(PsbW) of PS-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g27961 | No alias | component *(PsbW) of PS-II complex & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Solyc06g084050.4.1 | PSBW, Solyc06g084050 | component PsbW of PS-II complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0009507 | chloroplast | IEA | Interproscan |
| CC | GO:0009523 | photosystem II | IEA | Interproscan |
| BP | GO:0015979 | photosynthesis | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009806 | PSII_PsbW_class2 | 21 | 124 |
| No external refs found! |
