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  5. Aop_g19676

Aop_g19676 (WLIM1)


Aliases : WLIM1

Description : not classified & original description: none


Gene families : OG0001474 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001474_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g19676
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Als_g22072 No alias LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g44813 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g52332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g53600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13101 WLIM1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g43336 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20012 WLIM1 LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10224 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23314 No alias LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15252 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g28505 No alias LIM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g08587 No alias LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18614 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g61820 No alias LIM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g20568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g23761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g26863 WLIM1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g37521 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g51058 No alias LIM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g32114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43003 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 6 56
No external refs found!