Aliases : VAC1, ECB2, ATECB2
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00017p00256920 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00030p00109240 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G59200 | OTP80 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g007107 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03223 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05685 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07125 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19189 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26533 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26584 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g63751 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g69297 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene09924.t1 | REME1, Aspi01Gene09924 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g31685 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G062600.1 | Ceric.01G062600 | not classified & original description: pacid=50592906... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g17048 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g25885 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g36384 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g43859 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04286 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g30167 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04171 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g29548 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g37474 | LOI1, MEF11 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g16060 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g08857 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05054 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06990 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g07439 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g29380 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g32272 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g32959 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g61518 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002433 | No alias | EC_2.7 transferase transferring phosphorus-containing... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0038.g012016 | No alias | not classified & original description: CDS=1-3165 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0095.g019270 | No alias | not classified & original description: CDS=1-1617 | 0.03 | OrthoFinder output from all 47 species | |
| Smo83034 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g12249 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05207 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015358_P001 | Zm00001e015358 | Pentatricopeptide repeat-containing protein At5g39350... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e020583_P001 | Zm00001e020583 | Pentatricopeptide repeat-containing protein At2g33680... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | HCCA |
| MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 613 | 637 |
| IPR002885 | Pentatricopeptide_repeat | 512 | 533 |
| IPR002885 | Pentatricopeptide_repeat | 411 | 434 |
| IPR002885 | Pentatricopeptide_repeat | 53 | 111 |
| IPR002885 | Pentatricopeptide_repeat | 132 | 177 |
| IPR002885 | Pentatricopeptide_repeat | 436 | 485 |
| IPR002885 | Pentatricopeptide_repeat | 332 | 380 |
| IPR002885 | Pentatricopeptide_repeat | 538 | 585 |
| IPR002885 | Pentatricopeptide_repeat | 232 | 279 |
| No external refs found! |
