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  5. Aop_g20296

Aop_g20296 (4CL3)


Aliases : 4CL3

Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none


Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g20296

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00217510 ACOS5,... 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00217630 ACOS5,... 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G62940 ACOS5 acyl-CoA synthetase 5 0.02 OrthoFinder output from all 47 species
Aev_g02337 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Aob_g40572 AT4CL2, 4CL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20826 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007625 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0013.g013344 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Dac_g07445 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Dcu_g09728 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Gb_03647 4CL1, AT4CL1, 4CL.1 4-coumarate--CoA ligase OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
Gb_40573 4CL3 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.08 OrthoFinder output from all 47 species
LOC_Os08g14760.1 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 OrthoFinder output from all 47 species
Ore_g32420 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Pir_g08794 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Pir_g11346 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Solyc03g097030.3.1 4CL3, Solyc03g097030 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
Tin_g07442 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e008138_P001 ACOS5, Zm00001e008138 acyl-CoA synthetase (ACS5) 0.02 OrthoFinder output from all 47 species
Zm00001e022313_P002 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 30 441
IPR025110 AMP-bd_C 450 525
No external refs found!