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  5. Aop_g21032

Aop_g21032


Description : not classified & original description: none


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g21032

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00068760 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00016p00254860 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00023p00152840 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00170960 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00171820 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00085p00029680 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT3G47200 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G47210 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
Aop_g02375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36178.t1 Aspi01Gene36178 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene48414.t1 Aspi01Gene48414 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_20047 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os11g33394.1 LOC_Os11g33394 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g29620.1 LOC_Os12g29620 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10426384g0010 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10429513g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_9135g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp1g28190.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g23330.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g09307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g117260.2.1 Solyc03g117260 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g008900.4.1 Solyc04g008900 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc04g008920.1.1 Solyc04g008920 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g016020.1.1 Solyc04g016020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 38 459
No external refs found!