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  5. Aop_g21036

Aop_g21036


Description : not classified & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g21036

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00124260 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT1G15100 RHA2A RING-H2 finger A2A 0.03 OrthoFinder output from all 47 species
Aob_g30955 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene52668.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0079.g038347 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Azfi_s0420.g069158 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Cba_g21909 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
GSVIVT01008754001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os05g29710.1 LOC_Os05g29710 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Lfl_g18046 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
MA_222729g0010 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_3437366g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_55185g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6475030g0010 ATL3 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_7553g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g114190.1.1 Solyc03g114190 RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g123680.1.1 Solyc03g123680 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Spa_g05219 ATL4H not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007157_P001 Zm00001e007157 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e029032_P001 Zm00001e029032 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 256 299
No external refs found!