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  5. Aop_g21090

Aop_g21090


Description : LRR-domain extensin & original description: none


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g21090

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.02 OrthoFinder output from all 47 species
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.03 OrthoFinder output from all 47 species
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT2G15880 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT3G19020 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
Aev_g18679 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43377 LRX2 component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Als_g03749 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04968 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g10583 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13705 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18015 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11490 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00475.t1 LRX2, Aspi01Gene00475 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011627 LRX2 LRR-domain extensin & original description: CDS=1-1815 0.03 OrthoFinder output from all 47 species
Azfi_s0050.g031015 No alias LRR-domain extensin & original description: CDS=1-1719 0.04 OrthoFinder output from all 47 species
Cba_g03151 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14310 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.16G022500.1 Ceric.16G022500 LRR-domain extensin & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.24G073600.1 LRX2, Ceric.24G073600 LRR-domain extensin & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.32G025000.1 Ceric.32G025000 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g36028 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07517 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015416001 No alias Leucine-rich repeat extensin-like protein 4... 0.04 OrthoFinder output from all 47 species
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Gb_10910 LRX2 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Gb_26318 No alias LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Gb_27021 LRX2 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Gb_29819 LRX2 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os02g04540.1 LRX1, LOC_Os02g04540 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os03g43650.1 LOC_Os03g43650 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os05g09640.1 LOC_Os05g09640 Leucine-rich repeat extensin-like protein 4... 0.04 OrthoFinder output from all 47 species
LOC_Os07g07990.1 LOC_Os07g07990 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Lfl_g14745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17909 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g25390.1 No alias Leucine-rich repeat extensin-like protein 4... 0.01 OrthoFinder output from all 47 species
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.02 OrthoFinder output from all 47 species
Nbi_g11374 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16811 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31622 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.03 OrthoFinder output from all 47 species
Smo134330 LRX2 Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
Smo81544 LRX2 Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
Solyc01g108900.4.1 Solyc01g108900 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Solyc07g053840.1.1 Solyc07g053840 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Solyc10g050110.1.1 Solyc10g050110 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Spa_g37100 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53147 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022985_P003 Zm00001e022985 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Zm00001e031241_P001 Zm00001e031241 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 280 338
IPR001611 Leu-rich_rpt 162 219
No external refs found!