Aliases : GRP2B, ATGRP2B, ATCSP4
Description : cold-responsive mRNA chaperone *(CSD) & original description: none
Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g21369 | |
| Cluster | HCCA: Cluster_64 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ceric.22G017900.1 | ATCSP2, GRP2,... | cold-responsive mRNA chaperone *(CSD) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g32314 | GRP2B, ATGRP2B, ATCSP4 | cold-responsive mRNA chaperone *(CSD) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g08063 | GRP2B, ATGRP2B, ATCSP4 | cold-responsive mRNA chaperone *(CSD) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g08100 | No alias | cold-responsive mRNA chaperone *(CSD) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16894 | GRP2B, ATGRP2B, ATCSP4 | cold-responsive mRNA chaperone *(CSD) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Ppi_g19349 | GRP2B, ATGRP2B, ATCSP4 | cold-responsive mRNA chaperone *(CSD) & original... | 0.11 | OrthoFinder output from all 47 species | |
| Sam_g06106 | No alias | cold-responsive mRNA chaperone *(CSD) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g26933 | No alias | cold-responsive mRNA chaperone *(CSD) & original... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004096 | catalase activity | IEP | HCCA |
| MF | GO:0004129 | cytochrome-c oxidase activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| BP | GO:0009060 | aerobic respiration | IEP | HCCA |
| MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | HCCA |
| MF | GO:0016675 | oxidoreductase activity, acting on a heme group of donors | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0045333 | cellular respiration | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002059 | CSP_DNA-bd | 72 | 136 |
| No external refs found! |
