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  5. Lfl_g10801

Lfl_g10801


Description : component *(uS17c) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0002325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g10801

Target Alias Description ECC score Gene Family Method Actions
Ala_g13255 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Als_g47206 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dac_g17145 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ehy_g07306 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Mp5g05080.1 RPS17, CS17, PRPS17 component psRPS17 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Msp_g12962 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Nbi_g24135 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ore_g06145 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019876 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Sam_g38683 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g47246 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Spa_g48114 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 74 136
No external refs found!