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  5. Lfl_g10843

Lfl_g10843 (ATCCD1, CCD1, NCED1, ATNCED1)


Aliases : ATCCD1, CCD1, NCED1, ATNCED1

Description : EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase) & original description: none


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g10843

Target Alias Description ECC score Gene Family Method Actions
AT3G63520 ATCCD1, CCD1,... carotenoid cleavage dioxygenase 1 0.05 OrthoFinder output from all 47 species
Adi_g025413 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Adi_g060964 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Ala_g04422 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.08 OrthoFinder output from all 47 species
Als_g04634 ATCCD1, CCD1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18260 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Ceric.01G061900.1 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Ceric.01G106600.1 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000949.24 ATCCD1, CCD1,... No description available 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001128.6 ATCCD1, CCD1,... No description available 0.04 OrthoFinder output from all 47 species
Dcu_g03912 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Ehy_g11200 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ehy_g12236 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ehy_g21274 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
LOC_Os12g44310.1 ATCCD1, CCD1,... carotenoid cleavage dioxygenase (CCD1) 0.06 OrthoFinder output from all 47 species
Len_g08813 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Nbi_g12269 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ore_g10877 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Ore_g27316 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Pnu_g06396 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Pnu_g12721 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ppi_g33429 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ppi_g63649 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Solyc01g087270.3.1 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Pisum... 0.04 OrthoFinder output from all 47 species
Spa_g15685 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Tin_g08721 ATCCD1, CCD1,... EC_1.13 oxidoreductase acTing on single donor with... 0.05 OrthoFinder output from all 47 species
Zm00001e038960_P002 ATCCD1, CCD1,... carotenoid cleavage dioxygenase (CCD1) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 70 540
No external refs found!