Aliases : CLPR1, SVR2, NCLPP5
Description : non-proteolytic core component *(ClpR) of chloroplast Clp-type protease complex & original description: none
Gene families : OG0000988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000988_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00194810 | CLPR4,... | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00045p00207040 | evm_27.TU.AmTr_v1... | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00164p00068000 | CLPR1, SVR2,... | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G09130 | No alias | ATP-dependent caseinolytic (Clp) protease/crotonase... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G49970 | CLPR1, SVR2, NCLPP5 | CLP protease proteolytic subunit 1 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g019566 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g074670 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07767 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g03866 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g09550 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g00665 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g01710 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g02995 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene13918.t1 | Aspi01Gene13918 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0037.g025925 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g08836 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15422 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G040500.1 | CLPR1, SVR2,... | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G043400.1 | CLPR4, Ceric.04G043400 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g06754 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g10911 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g11508 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g02711 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_12676 | No alias | non-proteolytic core component ClpR of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os05g51450.1 | CLPR1, SVR2,... | non-proteolytic core component ClpR of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g08627 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g10203 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g01473 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
| MA_10429819g0020 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component ClpR of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g05047 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g06430 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g04693 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g05257 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g11210 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g07323 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g12837 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g07357 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g12637 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g13722 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g09209 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g13921 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g56753 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11367 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g16208 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g17176 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g17177 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g52083 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc01g099690.3.1 | Solyc01g099690 | non-proteolytic core component ClpR of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g049710.2.1 | CLPR1, SVR2,... | non-proteolytic core component ClpR of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g11689 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g12805 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g22875 | CLPR4 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e017288_P001 | CLPR4, Zm00001e017288 | non-proteolytic core component ClpR of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e032571_P001 | CLPR1, SVR2,... | non-proteolytic core component ClpR of chloroplast... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| BP | GO:0006721 | terpenoid metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| MF | GO:0015035 | protein-disulfide reductase activity | IEP | HCCA |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0046429 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0052592 | oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| MF | GO:2001070 | starch binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023562 | ClpP/TepA | 183 | 364 |
| No external refs found! |
