1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g10978

Lfl_g10978 (emb2734)


Aliases : emb2734

Description : nucleocytoplasmic import karyopherin *(IMB3) & original description: none


Gene families : OG0001766 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001766_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g10978
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00103300 emb2734,... Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
AT5G19820 emb2734 ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g078276 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Aev_g11168 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Ala_g02663 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.02 OrthoFinder output from all 47 species
Aob_g28680 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G003600.1 emb2734, Ceric.17G003600 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G014000.1 emb2734, Ceric.26G014000 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001030.12 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001030.13 emb2734 Protein translocation.nucleus.nucleocytoplasmic... 0.01 OrthoFinder output from all 47 species
Dcu_g04981 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g12588 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01025460001 emb2734 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
GSVIVT01033417001 emb2734 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Len_g16328 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.05 OrthoFinder output from all 47 species
MA_10432351g0030 emb2734 IMB3 nucleocytoplasmic import karyopherin 0.02 OrthoFinder output from all 47 species
Mp3g07820.1 emb2734 IMB3 nucleocytoplasmic import karyopherin 0.02 OrthoFinder output from all 47 species
Nbi_g03212 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g09038 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.04 OrthoFinder output from all 47 species
Ore_g34555 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.02 OrthoFinder output from all 47 species
Pir_g09795 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Smo140234 emb2734 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Spa_g12761 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.06 OrthoFinder output from all 47 species
Tin_g21538 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e005369_P004 emb2734, Zm00001e005369 IMB3 nucleocytoplasmic import karyopherin 0.02 OrthoFinder output from all 47 species
Zm00001e035335_P001 emb2734, Zm00001e035335 IMB3 nucleocytoplasmic import karyopherin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR041653 Importin_rep_4 286 376
IPR041389 Importin_rep_6 785 892
IPR000357 HEAT 925 953
No external refs found!