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  5. Aop_g24260

Aop_g24260


Description : component *(eL22) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000996 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000996_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g24260
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AT3G05560 No alias Ribosomal L22e protein family 0.02 OrthoFinder output from all 47 species
Als_g19592 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Aob_g15050 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g21293 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ceric.26G014800.1 Ceric.26G014800 component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001206.7 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Cre07.g357850 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Dac_g04863 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Gb_08874 No alias component RPL22 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Gb_36164 No alias component RPL22 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os03g22340.1 LOC_Os03g22340 component RPL22 of LSU proteome component 0.02 OrthoFinder output from all 47 species
MA_130453g0010 No alias component RPL22 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp4g02920.1 No alias component RPL22 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Pir_g40025 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c11_630V3.1 Pp3c11_630 Ribosomal L22e protein family 0.01 OrthoFinder output from all 47 species
Pp3c1_120V3.1 Pp3c1_120 Ribosomal L22e protein family 0.01 OrthoFinder output from all 47 species
Pp3c2_28500V3.1 Pp3c2_28500 Ribosomal L22e protein family 0.01 OrthoFinder output from all 47 species
Pp3c2_28510V3.1 Pp3c2_28510 Ribosomal L22e protein family 0.01 OrthoFinder output from all 47 species
Solyc01g099830.3.1 Solyc01g099830 component RPL22 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Tin_g36488 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 25 129
No external refs found!