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  5. Lfl_g11163

Lfl_g11163 (UBP25)


Aliases : UBP25

Description : not classified & original description: none


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g11163

Target Alias Description ECC score Gene Family Method Actions
AT1G17110 UBP15 ubiquitin-specific protease 15 0.03 OrthoFinder output from all 47 species
AT3G14400 UBP25 ubiquitin-specific protease 25 0.03 OrthoFinder output from all 47 species
AT4G24560 UBP16 ubiquitin-specific protease 16 0.04 OrthoFinder output from all 47 species
Adi_g013898 UBP25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27664 UBP25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30011 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00561.t1 UBP25, Aspi01Gene00561 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0078.g038135 UBP19 deubiquitinase *(UBP15-21) & original description: CDS=1162-3228 0.03 OrthoFinder output from all 47 species
Ceric.15G035800.1 UBP19, Ceric.15G035800 deubiquitinase *(UBP15-21) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.22G015900.1 UBP25, Ceric.22G015900 not classified & original description: pacid=50613832... 0.05 OrthoFinder output from all 47 species
Dac_g01006 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03145 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07912 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001912001 UBP23 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01014079001 UBP23 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
LOC_Os05g43480.1 UBP25, LOC_Os05g43480 deubiquitinase (UBP25) 0.07 OrthoFinder output from all 47 species
LOC_Os08g37350.1 UBP17, LOC_Os08g37350 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
MA_132593g0020 UBP23 Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_717g0010 UBP19 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Mp1g03220.1 UBP25 Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g05560.1 UBP18 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
Ore_g27850 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05280 UBP25 deubiquitinase *(UBP25) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08769 UBP25 deubiquitinase *(UBP25) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g04367 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo420048 UBP18 Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
Solyc04g076210.3.1 UBP16, Solyc04g076210 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
Solyc08g069050.3.1 UBP19, Solyc08g069050 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Spa_g12821 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01115 UBP23 deubiquiTinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05216 UBP25 deubiquiTinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003832_P001 UBP17, Zm00001e003832 deubiquitinase (UBP15-21) 0.04 OrthoFinder output from all 47 species
Zm00001e022516_P001 UBP17, Zm00001e022516 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
Zm00001e024878_P003 UBP15, Zm00001e024878 deubiquitinase (UBP15-21) 0.05 OrthoFinder output from all 47 species
Zm00001e027381_P003 UBP25, Zm00001e027381 deubiquitinase (UBP25) 0.04 OrthoFinder output from all 47 species
Zm00001e036315_P001 UBP23, Zm00001e036315 deubiquitinase (UBP23) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 23 339
No external refs found!