Aop_g26509


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g26509
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AT5G43790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g21218 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16770 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g26538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28495 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g32921 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35048.t1 Aspi01Gene35048 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000621 No alias ssDNA-binding protein *(OSB) & original description: CDS=97-654 0.06 OrthoFinder output from all 47 species
Cba_g00281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g58730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67712 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G031200.1 DOT4, Ceric.03G031200 not classified & original description: pacid=50571902... 0.03 OrthoFinder output from all 47 species
Ceric.07G016600.1 Ceric.07G016600 not classified & original description: pacid=50626137... 0.04 OrthoFinder output from all 47 species
Ceric.07G067300.1 Ceric.07G067300 not classified & original description: pacid=50625994... 0.04 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.05 OrthoFinder output from all 47 species
Ceric.22G034400.1 Ceric.22G034400 not classified & original description: pacid=50613809... 0.03 OrthoFinder output from all 47 species
Ceric.23G075200.1 Ceric.23G075200 not classified & original description: pacid=50610693... 0.05 OrthoFinder output from all 47 species
Ceric.26G058400.1 VAC1, ECB2,... not classified & original description: pacid=50598871... 0.05 OrthoFinder output from all 47 species
Ceric.34G057700.1 CRR2, Ceric.34G057700 not classified & original description: pacid=50623387... 0.04 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.06 OrthoFinder output from all 47 species
Ceric.37G004200.1 Ceric.37G004200 not classified & original description: pacid=50616137... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Dac_g05543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22254 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05493 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04912 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16502 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28824 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g39554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g40952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g44017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47657 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03855 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04113 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04365 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18209 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g49921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06850 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g04421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28801 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g41092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04450 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06747 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g06822 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10358 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22740 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g31920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38619 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g15731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20675 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009200 OTP82 not classified & original description: CDS=343-1080 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019330 No alias not classified & original description: CDS=1-2295 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020628 No alias not classified & original description: CDS=1-699 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022201 No alias not classified & original description: CDS=265-2808 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022787 No alias not classified & original description: CDS=1-1491 0.04 OrthoFinder output from all 47 species
Sam_g12540 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000621_P001 CRR22, Zm00001e000621 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 27 54
IPR002885 Pentatricopeptide_repeat 191 215
IPR002885 Pentatricopeptide_repeat 117 163
No external refs found!