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  5. Aop_g26624

Aop_g26624


Description : component *(uL24) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000884 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000884_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g26624
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AT3G49910 No alias Translation protein SH3-like family protein 0.04 OrthoFinder output from all 47 species
AT5G67510 No alias Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Cba_g20992 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Cre01.g040000 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g24782 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Gb_05675 No alias component RPL26 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Gb_06102 No alias component RPL26 of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_13141g0010 No alias component RPL26 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp2g12870.1 No alias component RPL26 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Pp3c1_25000V3.1 Pp3c1_25000 Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Pp3c2_15910V3.1 Pp3c2_15910 Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Ppi_g23036 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g33996 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g05724 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g54872 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR005756 Ribosomal_L26/L24P_euk/arc 9 122
IPR005824 KOW 52 83
No external refs found!