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  5. Aop_g27349

Aop_g27349


Description : not classified & original description: none


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g27349

Target Alias Description ECC score Gene Family Method Actions
Aev_g44899 ORF158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g45361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08759 ORF158 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18250 ORF158 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22330 ORF107E not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06010.t1 Aspi01Gene06010 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06550.t1 Aspi01Gene06550 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15957.t1 Aspi01Gene15957 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44448.t1 Aspi01Gene44448 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55963.t1 Aspi01Gene55963 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60539.t1 ORF158, Aspi01Gene60539 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33114 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g69455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g69613 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33867 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g32790 ORF158 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12094 ORF158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01344 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19185 ORF158 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041577 RT_RNaseH_2 997 1097
IPR002156 RNaseH_domain 1183 1303
IPR001584 Integrase_cat-core 1450 1547
IPR045358 Ty3_capsid 7 168
IPR041588 Integrase_H2C2 1381 1434
IPR000477 RT_dom 776 934
IPR001878 Znf_CCHC 264 279
No external refs found!