Aop_g28216


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g28216

Target Alias Description ECC score Gene Family Method Actions
AT2G02980 OTP85 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g002777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g003168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004400 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g008563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g011092 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g036031 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g036673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g055474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067278 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075582 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087501 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g103055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g114678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g114947 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g30051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21473 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22281 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23948 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28509 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g61281 EMB2758 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14074.t1 CRR22, Aspi01Gene14074 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G018600.1 Ceric.01G018600 not classified & original description: pacid=50592052... 0.04 OrthoFinder output from all 47 species
Ceric.09G009700.1 Ceric.09G009700 not classified & original description: pacid=50587563... 0.04 OrthoFinder output from all 47 species
Ceric.15G066400.1 Ceric.15G066400 not classified & original description: pacid=50640755... 0.04 OrthoFinder output from all 47 species
Ceric.18G000100.1 CRR22, Ceric.18G000100 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.23G042100.1 Ceric.23G042100 not classified & original description: pacid=50611070... 0.04 OrthoFinder output from all 47 species
Ceric.30G017600.1 Ceric.30G017600 not classified & original description: pacid=50608172... 0.06 OrthoFinder output from all 47 species
Ceric.30G066500.1 Ceric.30G066500 not classified & original description: pacid=50608384... 0.03 OrthoFinder output from all 47 species
Ceric.32G058000.1 Ceric.32G058000 not classified & original description: pacid=50598467... 0.03 OrthoFinder output from all 47 species
Dac_g07774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19384 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22014 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g50301 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g42280.1 CRR21, LOC_Os01g42280 RNA editing factor (CRR21) 0.02 OrthoFinder output from all 47 species
LOC_Os01g62910.1 CRR2, LOC_Os01g62910 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g58100.1 OTP85, LOC_Os03g58100 RNA editing factor (OTP85) 0.05 OrthoFinder output from all 47 species
LOC_Os04g51350.1 LOC_Os04g51350 RNA editing factor (AEF1) 0.03 OrthoFinder output from all 47 species
LOC_Os07g07620.1 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
Len_g02881 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54671 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33833 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g42421 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20499 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02916 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13291 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g43020 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001920 OTP86 not classified & original description: CDS=1-2427 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002209 No alias not classified & original description: CDS=347-2416 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003965 No alias not classified & original description: CDS=1-4143 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004036 OTP84 not classified & original description: CDS=1-1773 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005856 No alias not classified & original description: CDS=1-2292 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007537 No alias not classified & original description: CDS=117-2237 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008323 No alias not classified & original description: CDS=476-3628 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019001 No alias not classified & original description: CDS=1-2865 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021130 No alias not classified & original description: CDS=1-2961 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022971 No alias not classified & original description: CDS=343-1173 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024060 No alias not classified & original description: CDS=1-2526 0.03 OrthoFinder output from all 47 species
Sam_g14540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08176 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g08732 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g09049 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g14002 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14020 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14566 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18556 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20454 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24109 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g25259 MEF21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26143 MEF1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26517 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27801 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g27883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29428 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30111 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g38315 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g40518 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g44783 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45037 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45048 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45259 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g45261 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53265 MEF19 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53491 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53704 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g53894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56371 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g17476 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 198 245
IPR002885 Pentatricopeptide_repeat 96 143
No external refs found!