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  5. Aop_g29166

Aop_g29166 (AtCESA1, RSW1, CESA1)


Aliases : AtCESA1, RSW1, CESA1

Description : catalytic component *(CesA) of cellulose synthase complex & original description: none


Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g29166
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Adi_g104894 IXR1, CEV1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27306 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
GSVIVT01006761001 ATCSLE1, CSLE1 Cellulose synthase-like protein E6 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
GSVIVT01007042001 ATCSLE1, CSLE1 Cellulose synthase-like protein E6 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
GSVIVT01007333001 ATCSLE1, CSLE1 Cellulose synthase-like protein E1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01027716001 ATCSLG2, CSLG2 Cellulose synthase-like protein G2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01030467001 CSLB04, ATCSLB4, ATCSLB04 Cellulose synthase-like protein H1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os04g35030.1 CSLB04, ATCSLB4,... Putative cellulose synthase-like protein H3 OS=Oryza... 0.02 OrthoFinder output from all 47 species
LOC_Os07g36630.1 ATCSLD5, CSLD5,... D-glucan synthase (CSLF) 0.03 OrthoFinder output from all 47 species
Lfl_g08211 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
MA_10436687g0010 ATCSLE1, CSLE1 Cellulose synthase-like protein E1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_174181g0010 IXR1, CEV1,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
MA_415945g0010 ATCSLB05, CSLB05, ATCSLB5 Cellulose synthase-like protein B5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_9184g0010 MUR10, ATCESA7,... Cellulose synthase A catalytic subunit 7 [UDP-forming]... 0.02 OrthoFinder output from all 47 species
Mp2g05640.1 ATCSLD3, KJK, CSLD3 mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
Ore_g29917 IXR1, CEV1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31396 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Pnu_g31509 IXR1, CEV1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009438 ATCSLD5, CSLD5, SOS6 mannan synthase *(CSLD) & original description: CDS=1-3633 0.02 OrthoFinder output from all 47 species
Sam_g38935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05238 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA Interproscan
BP GO:0030244 cellulose biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR027934 CES_Znf_RING 28 105
IPR005150 Cellulose_synth 357 1073
No external refs found!