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  5. Aop_g29612

Aop_g29612 (CCR2, ATGRP7, GRP7, GR-RBP7)


Aliases : CCR2, ATGRP7, GRP7, GR-RBP7

Description : not classified & original description: none


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g29612

Target Alias Description ECC score Gene Family Method Actions
AT5G04280 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 OrthoFinder output from all 47 species
Adi_g014441 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g022151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053659 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083735 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106770 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107607 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38249 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27510 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06469 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0136.g050935 GRP2, ATGRP2, GR-RBP2 not classified & original description: CDS=1-543 0.03 OrthoFinder output from all 47 species
Azfi_s0468.g072856 GR-RBP4, GRP4 not classified & original description: CDS=1-582 0.03 OrthoFinder output from all 47 species
Cba_g06390 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27479 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38953 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G018200.1 Ceric.12G018200 RNA chaperone *(RZ1) & original description:... 0.02 OrthoFinder output from all 47 species
Cre17.g729150 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g03970 GR-RBP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24341 CCR2, ATGRP7,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g06304 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g52563 CCR2, ATGRP7,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g09025 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16429 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21349 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001672001 ATRZ-1A Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_39691 No alias RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species
Len_g06168 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_168323g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Msp_g12851 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12890 No alias RNA chaperone *(RZ1) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g07678 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15237 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33177 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04562 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12344 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12375 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23666 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g10142 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10789 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18834 No alias RNA chaperone *(RZ1) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g32569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c4_6610V3.1 GRP2, ATGRP2,... glycine-rich RNA-binding protein 3 0.01 OrthoFinder output from all 47 species
Ppi_g57632 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0220.g026168 GR-RBP3 RNA editing factor *(ORRM3) & original description: CDS=1-420 0.03 OrthoFinder output from all 47 species
Sam_g14736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26697 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52143 No alias RNA chaperone *(RZ1) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g071560.4.1 Solyc03g071560 RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Solyc10g047130.2.1 ATRZ-1A, Solyc10g047130 RNA chaperone (RZ1|GR-RBP) 0.05 OrthoFinder output from all 47 species
Spa_g10567 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12557 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22222 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22379 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22687 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30660 GR-RBP3 RNA ediTing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018330_P004 GR-RBP3, Zm00001e018330 RNA editing factor (ORRM) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 11 79
No external refs found!