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  5. Aop_g30138

Aop_g30138 (PSBW)


Aliases : PSBW

Description : component *(PsbW) of PS-II complex & original description: none


Gene families : OG0002050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g30138
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00266120 PSBW,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.14 OrthoFinder output from all 47 species
AT2G30570 PSBW photosystem II reaction center W 0.13 OrthoFinder output from all 47 species
Aev_g47226 MAC3A not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ala_g04986 No alias component *(PsbW) of PS-II complex & original description: none 0.12 OrthoFinder output from all 47 species
Als_g12837 PSBW component *(PsbW) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Als_g56334 PSBW component *(PsbW) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Aob_g15176 No alias component *(PsbW) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g32667 PSBW component *(PsbW) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g35726 PSBW component *(PsbW) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene42600.t1 PSBW, Aspi01Gene42600 component *(PsbW) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0036.g025757 PSBW component *(PsbW) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G036500.1 PSBW, Ceric.06G036500 component *(PsbW) of PS-II complex & original... 0.09 OrthoFinder output from all 47 species
Ceric.32G066400.1 PSBW, Ceric.32G066400 component *(PsbW) of PS-II complex & original... 0.15 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001234.7 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.04 OrthoFinder output from all 47 species
Dac_g08641 PSBW component *(PsbW) of PS-II complex & original description: none 0.2 OrthoFinder output from all 47 species
Dcu_g00119 PSBW component *(PsbW) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g18523 PSBW component *(PsbW) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g20782 PSBW component *(PsbW) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Ehy_g00627 PSBW component *(PsbW) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g01886 PSBW component *(PsbW) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g04368 PSBW component *(PsbW) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01000743001 PSBW Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.1 OrthoFinder output from all 47 species
GSVIVT01036277001 PSBW Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.14 OrthoFinder output from all 47 species
Gb_40726 PSBW component PsbW of PS-II complex 0.04 OrthoFinder output from all 47 species
LOC_Os01g56680.2 PSBW, LOC_Os01g56680 component PsbW of PS-II complex 0.13 OrthoFinder output from all 47 species
LOC_Os05g43310.1 PSBW, LOC_Os05g43310 component PsbW of PS-II complex 0.09 OrthoFinder output from all 47 species
Lfl_g00156 PSBW component *(PsbW) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g03716 PSBW component *(PsbW) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17355 PSBW component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19670 PSBW component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431532g0010 PSBW component PsbW of PS-II complex 0.13 OrthoFinder output from all 47 species
Mp5g14190.1 PSBW component PsbW of PS-II complex 0.22 OrthoFinder output from all 47 species
Msp_g20236 PSBW component *(PsbW) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Msp_g20237 PSBW component *(PsbW) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Msp_g44518 PSBW component *(PsbW) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g10497 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23251 PSBW component *(PsbW) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g31677 PSBW component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06296 PSBW component *(PsbW) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Pnu_g12705 PSBW component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c18_6770V3.1 PSBW, Pp3c18_6770 photosystem II reaction center W 0.09 OrthoFinder output from all 47 species
Pp3c22_16330V3.1 PSBW, Pp3c22_16330 photosystem II reaction center W 0.09 OrthoFinder output from all 47 species
Ppi_g11136 PSBW component *(PsbW) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g25239 No alias component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019011 PSBW component *(PsbW) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019755 PSBW component *(PsbW) of PS-II complex & original... 0.04 OrthoFinder output from all 47 species
Solyc06g084050.4.1 PSBW, Solyc06g084050 component PsbW of PS-II complex 0.17 OrthoFinder output from all 47 species
Solyc09g065910.3.1 PSBW, Solyc09g065910 component PsbW of PS-II complex 0.02 OrthoFinder output from all 47 species
Spa_g01488 PSBW component *(PsbW) of PS-II complex & original description: none 0.17 OrthoFinder output from all 47 species
Spa_g23538 PSBW component *(PsbW) of PS-II complex & original description: none 0.21 OrthoFinder output from all 47 species
Spa_g48859 PSBW component *(PsbW) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g52574 PSBW component *(PsbW) of PS-II complex & original description: none 0.16 OrthoFinder output from all 47 species
Tin_g24382 PSBW component *(PsbW) of PS-II complex & original description: none 0.14 OrthoFinder output from all 47 species
Tin_g24383 PSBW component *(PsbW) of PS-II complex & original description: none 0.14 OrthoFinder output from all 47 species
Zm00001e019660_P002 PSBW, Zm00001e019660 component PsbW of PS-II complex 0.08 OrthoFinder output from all 47 species
Zm00001e027386_P002 PSBW, Zm00001e027386 component PsbW of PS-II complex 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR009806 PSII_PsbW_class2 59 190
No external refs found!