Description : helicase UAP56 & original description: none
Gene families : OG0002123 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002123_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g30475 | |
| Cluster | HCCA: Cluster_329 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g055943 | No alias | helicase UAP56 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g13080 | No alias | helicase UAP56 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32429 | No alias | helicase UAP56 & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene28601.t1 | Aspi01Gene28601 | helicase UAP56 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene43281.t1 | Aspi01Gene43281 | helicase UAP56 & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07010 | No alias | helicase UAP56 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g77168 | No alias | helicase UAP56 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001376.20 | No alias | RNA processing.messenger ribonucleoprotein particle... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_14863 | No alias | RNA helicase (Sub2). helicase component UAP56 of... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g36890.2 | LOC_Os01g36890 | RNA helicase (Sub2). helicase component UAP56 of... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g43528 | No alias | helicase UAP56 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g07693 | No alias | helicase UAP56 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027715_P001 | Zm00001e027715 | RNA helicase (Sub2). helicase component UAP56 of... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| BP | GO:0031179 | peptide modification | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| No external refs found! |
