Aliases : HMGB5, NFD5, NFD05, HMGD
Description : not classified & original description: none
Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g30507 | |
| Cluster | HCCA: Cluster_96 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g119471 | NFD03, HMGB3, NFD3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g61427 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g19258 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32302 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g13765 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo29503 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e020222_P001 | Zm00001e020222 | High mobility group B protein 14 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0004592 | pantoate-beta-alanine ligase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | HCCA |
| BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0015939 | pantothenate metabolic process | IEP | HCCA |
| BP | GO:0015940 | pantothenate biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009071 | HMG_box_dom | 120 | 188 |
| No external refs found! |
