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  5. Aop_g31284

Aop_g31284 (ATWBC11, ABCG11, DSO,...)


Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g31284
Cluster HCCA: Cluster_285

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00216p00024260 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s01903p00008330 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Als_g19815 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01002136001 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
GSVIVT01002949001 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
LOC_Os09g29660.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Nbi_g19695 ATWBC11, ABCG11,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g24075 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e034438_P001 ATWBC11, ABCG11,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 218 427
IPR003439 ABC_transporter-like_ATP-bd 8 63
IPR043926 ABCG_dom 92 149
No external refs found!