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  5. Lfl_g11806

Lfl_g11806


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g11806

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00221710 RHA2A,... Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G35330 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G63840 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G35000 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G61550 No alias RING/U-box superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G09130 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G15975 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G30400 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G42200 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g07665 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09630 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12179 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g15196 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aev_g40193 BRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03725 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aob_g01064 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03307 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aob_g30636 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g11862 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g13275 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Aop_g19646 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g68751 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene00937.t1 BRH1, Aspi01Gene00937 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27966.t1 Aspi01Gene27966 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28289.t1 Aspi01Gene28289 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36586.t1 Aspi01Gene36586 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene37667.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene49237.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Azfi_s0054.g033681 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g09408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G012300.1 BRH1, Ceric.03G012300 not classified & original description: pacid=50572071... 0.02 OrthoFinder output from all 47 species
Ceric.03G066200.1 Ceric.03G066200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.22G069000.1 Ceric.22G069000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.29G079200.1 Ceric.29G079200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020684.6 SDIR1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Dac_g03534 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14977 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.07 OrthoFinder output from all 47 species
Dac_g34610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g00837 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g01132 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g01515 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g17960 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g25638 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g19870 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ehy_g05299 BRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06688 MEE16 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g28710 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01012019001 XERICO Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01023776001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Gb_00010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_05381 No alias RHA2 signal transducer of abscisic acid perception 0.02 OrthoFinder output from all 47 species
Gb_14785 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_15297 No alias RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Gb_20461 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_22087 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Gb_32878 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_41385 No alias RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
LOC_Os01g11500.1 LOC_Os01g11500 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g16120.1 RHA2A, LOC_Os01g16120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g05560.1 LOC_Os03g05560 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os06g11450.1 ATL31, CNI1,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os08g06090.1 RHA3B, LOC_Os08g06090 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g42390.1 LOC_Os10g42390 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os11g47690.1 LOC_Os11g47690 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_125507g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_130176g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_17249g0010 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_78702g0010 ATL8 RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_80729g0030 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_98187g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Mp2g11860.1 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Msp_g00957 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g10125 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Msp_g11890 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Nbi_g06650 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g14314 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g38146 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10421 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g32953 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g43484 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g01265 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g17726 ATL31, CNI1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g55293 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g55439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03072 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ppi_g05782 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g06344 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g24030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000797 ATL8 not classified & original description: CDS=1-573 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013072 ATL8 not classified & original description: CDS=1-573 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021081 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022169 No alias not classified & original description: CDS=1-657 0.03 OrthoFinder output from all 47 species
Sam_g25474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo438800 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Smo74486 RHA3B Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc01g081040.4.1 Solyc01g081040 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc01g095810.3.1 Solyc01g095810 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc01g100100.4.1 Solyc01g100100 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g038805.1.1 Solyc02g038805 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc05g010170.2.1 XERICO, Solyc05g010170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g081790.1.1 Solyc10g081790 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc11g007530.2.1 Solyc11g007530 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Spa_g09927 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Spa_g10665 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g17343 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g51562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51618 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g01893 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.08 OrthoFinder output from all 47 species
Tin_g26214 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g28275 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e022175_P001 Zm00001e022175 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Zm00001e023585_P001 Zm00001e023585 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e024866_P001 ATL43, Zm00001e024866 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e032186_P001 RHA3B, Zm00001e032186 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e039314_P001 Zm00001e039314 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 136 179
No external refs found!