1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g12062

Lfl_g12062


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g12062

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00200350 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G58470 RBP1, ATRBP1 RNA-binding protein 1 0.03 OrthoFinder output from all 47 species
Adi_g112695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41903.t1 Aspi01Gene41903 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0288.g063213 No alias not classified & original description: CDS=60-1199 0.03 OrthoFinder output from all 47 species
Cba_g09256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G061100.1 Ceric.19G061100 not classified & original description: pacid=50575703... 0.04 OrthoFinder output from all 47 species
Ceric.24G054300.1 Ceric.24G054300 not classified & original description: pacid=50629415... 0.03 OrthoFinder output from all 47 species
Dcu_g01173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_33485 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_35079 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_39961 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03240.1 LOC_Os07g03240 RNA-binding protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os10g33230.1 LOC_Os10g33230 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g27754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00898 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06905 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007884 No alias not classified & original description: CDS=207-1496 0.02 OrthoFinder output from all 47 species
Sam_g40264 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07867 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014461_P003 Zm00001e014461 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e024934_P002 Zm00001e024934 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e030652_P001 Zm00001e030652 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 71
IPR000504 RRM_dom 109 167
No external refs found!