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  5. Aop_g34888

Aop_g34888


Description : component *(eS26) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001368 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001368_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g34888
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
AT2G40510 No alias Ribosomal protein S26e family protein 0.07 OrthoFinder output from all 47 species
AT2G40590 No alias Ribosomal protein S26e family protein 0.03 OrthoFinder output from all 47 species
AT3G56340 No alias Ribosomal protein S26e family protein 0.11 OrthoFinder output from all 47 species
Cba_g20558 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ceric.21G032100.1 Ceric.21G032100 component *(eS26) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001486.9 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
Cre16.g682300 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Dac_g33608 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01032696001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
LOC_Os01g60790.1 LOC_Os01g60790 component RPS26 of SSU proteome 0.08 OrthoFinder output from all 47 species
LOC_Os05g39960.1 LOC_Os05g39960 component RPS26 of SSU proteome 0.06 OrthoFinder output from all 47 species
Mp2g06210.1 No alias component RPS26 of SSU proteome 0.03 OrthoFinder output from all 47 species
Pir_g09911 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c16_9210V3.1 Pp3c16_9210 Ribosomal protein S26e family protein 0.06 OrthoFinder output from all 47 species
Pp3c5_16070V3.1 Pp3c5_16070 Ribosomal protein S26e family protein 0.01 OrthoFinder output from all 47 species
Pp3c6_8910V3.1 Pp3c6_8910 Ribosomal protein S26e family protein 0.02 OrthoFinder output from all 47 species
Sam_g15700 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sam_g20299 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g47002 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g48093 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Smo77589 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Solyc04g008810.3.1 Solyc04g008810 component RPS26 of SSU proteome 0.05 OrthoFinder output from all 47 species
Spa_g36890 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Tin_g26404 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e011780_P001 Zm00001e011780 component RPS26 of SSU proteome 0.05 OrthoFinder output from all 47 species
Zm00001e027298_P001 Zm00001e027298 component RPS26 of SSU proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000892 Ribosomal_S26e 1 103
No external refs found!