Description : component *(SF3B1) of splicing factor 3B complex & original description: none
Gene families : OG0002634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002634_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g36775 | |
| Cluster | HCCA: Cluster_331 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g02669 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g10272 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G008400.1 | Ceric.02G008400 | component *(SF3B1) of splicing factor 3B complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g02908 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_12533 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_14294 | No alias | component SF3B1 of splicing factor 3B complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g04950.1 | LOC_Os02g04950 | component SF3B1 of splicing factor 3B complex | 0.04 | OrthoFinder output from all 47 species | |
| MA_11685g0010 | No alias | component SF3B1 of splicing factor 3B complex | 0.04 | OrthoFinder output from all 47 species | |
| Mp5g19650.1 | No alias | component SF3B1 of splicing factor 3B complex | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g04463 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.07 | OrthoFinder output from all 47 species | |
| Pnu_g13320 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Smo97336 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e025224_P001 | Zm00001e025224 | component SF3B1 of splicing factor 3B complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR015016 | SF3b_su1 | 285 | 415 |
| No external refs found! |
