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  5. Aop_g38086

Aop_g38086 (VLN4, ATVLN4)


Aliases : VLN4, ATVLN4

Description : villin actin-crosslinking factor & original description: none


Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g38086
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Ala_g23196 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g50439 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40168 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02237 VLN4, ATVLN4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g05233 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.33G042500.1 VLN4, ATVLN4,... villin actin-crosslinking factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g39503 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01024752001 VLN1, ATVLN1 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Gb_25295 VLN4, ATVLN4 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Gb_31397 ATVLN3, VLN3 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Gb_40777 ATVLN3, VLN3 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g24220.2 ATVLN2, VLN2,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
LOC_Os04g51440.1 VLN4, ATVLN4,... villin actin-crosslinking factor 0.04 OrthoFinder output from all 47 species
LOC_Os05g06110.1 VLN1, ATVLN1,... villin actin-crosslinking factor 0.04 OrthoFinder output from all 47 species
Len_g29289 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29649 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16223 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_9118625g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g24640.1 ATVLN3, VLN3 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Msp_g14171 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31948 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04677 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52860 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60064 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10560 No alias villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g021420.3.1 VLN4, ATVLN4,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
Spa_g09598 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47063 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g31418 VLN4, ATVLN4 villin acTin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001712_P002 ATVLN2, VLN2,... villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Zm00001e018617_P001 ATVLN2, VLN2,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
Zm00001e031068_P001 VLN1, ATVLN1,... villin actin-crosslinking factor 0.04 OrthoFinder output from all 47 species
Zm00001e038175_P001 ATVLN2, VLN2,... villin actin-crosslinking factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR003128 Villin_headpiece 970 1005
IPR007123 Gelsolin-like_dom 614 661
IPR007123 Gelsolin-like_dom 31 109
IPR007123 Gelsolin-like_dom 409 477
IPR007123 Gelsolin-like_dom 150 213
IPR007123 Gelsolin-like_dom 263 315
No external refs found!