Aop_g38925 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g38925

Target Alias Description ECC score Gene Family Method Actions
Ala_g02572 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17278 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21415 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35641 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36549 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38464 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18037 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57876 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g61852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03193 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03915 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g04924 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009250 DOT4 not classified & original description: CDS=1-1692 0.06 OrthoFinder output from all 47 species
Azfi_s0007.g010913 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-1608 0.04 OrthoFinder output from all 47 species
Azfi_s0098.g043939 EMB2758 not classified & original description: CDS=1-1746 0.05 OrthoFinder output from all 47 species
Azfi_s0235.g059459 OTP86 not classified & original description: CDS=1-2445 0.04 OrthoFinder output from all 47 species
Azfi_s0254.g060431 No alias not classified & original description: CDS=1-2856 0.04 OrthoFinder output from all 47 species
Azfi_s3759.g116773 CRR2 not classified & original description: CDS=1-1509 0.05 OrthoFinder output from all 47 species
Cba_g04675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05305 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g06290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07683 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g10890 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19875 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20040 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Cba_g20185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34771 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67914 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g76573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G127400.1 VAC1, ECB2,... not classified & original description: pacid=50592739... 0.03 OrthoFinder output from all 47 species
Ceric.02G109100.1 VAC1, ECB2,... not classified & original description: pacid=50584630... 0.04 OrthoFinder output from all 47 species
Ceric.05G035800.1 Ceric.05G035800 not classified & original description: pacid=50577834... 0.04 OrthoFinder output from all 47 species
Ceric.07G016600.1 Ceric.07G016600 not classified & original description: pacid=50626137... 0.05 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.08 OrthoFinder output from all 47 species
Ceric.07G098300.1 CRR22, Ceric.07G098300 not classified & original description: pacid=50626946... 0.1 OrthoFinder output from all 47 species
Ceric.09G066700.1 Ceric.09G066700 not classified & original description: pacid=50588343... 0.04 OrthoFinder output from all 47 species
Ceric.09G092300.1 Ceric.09G092300 not classified & original description: pacid=50588334... 0.04 OrthoFinder output from all 47 species
Ceric.10G007000.1 Ceric.10G007000 not classified & original description: pacid=50613077... 0.02 OrthoFinder output from all 47 species
Ceric.11G067400.1 Ceric.11G067400 not classified & original description: pacid=50595438... 0.06 OrthoFinder output from all 47 species
Ceric.13G039400.1 Ceric.13G039400 not classified & original description: pacid=50635903... 0.03 OrthoFinder output from all 47 species
Ceric.14G063100.1 Ceric.14G063100 not classified & original description: pacid=50634149... 0.03 OrthoFinder output from all 47 species
Ceric.15G074900.1 Ceric.15G074900 not classified & original description: pacid=50640124... 0.03 OrthoFinder output from all 47 species
Ceric.18G049300.1 Ceric.18G049300 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z131300.1 CRR22, Ceric.1Z131300 not classified & original description: pacid=50639026... 0.04 OrthoFinder output from all 47 species
Ceric.1Z201600.1 Ceric.1Z201600 not classified & original description: pacid=50565787... 0.04 OrthoFinder output from all 47 species
Ceric.20G040800.1 OTP86, Ceric.20G040800 not classified & original description: pacid=50566943... 0.02 OrthoFinder output from all 47 species
Ceric.21G046200.1 Ceric.21G046200 not classified & original description: pacid=50604280... 0.03 OrthoFinder output from all 47 species
Ceric.21G054200.1 Ceric.21G054200 not classified & original description: pacid=50602892... 0.04 OrthoFinder output from all 47 species
Ceric.22G073800.1 Ceric.22G073800 not classified & original description: pacid=50614043... 0.05 OrthoFinder output from all 47 species
Ceric.23G082400.1 CRR22, Ceric.23G082400 not classified & original description: pacid=50611294... 0.05 OrthoFinder output from all 47 species
Ceric.26G006200.1 Ceric.26G006200 not classified & original description: pacid=50598886... 0.03 OrthoFinder output from all 47 species
Ceric.27G036800.1 VAC1, ECB2,... not classified & original description: pacid=50605276... 0.03 OrthoFinder output from all 47 species
Ceric.28G070600.1 Ceric.28G070600 not classified & original description: pacid=50569629... 0.05 OrthoFinder output from all 47 species
Ceric.31G020200.1 Ceric.31G020200 not classified & original description: pacid=50574865... 0.02 OrthoFinder output from all 47 species
Ceric.32G048400.1 Ceric.32G048400 not classified & original description: pacid=50598667... 0.04 OrthoFinder output from all 47 species
Ceric.33G061000.1 OTP84, Ceric.33G061000 not classified & original description: pacid=50606666... 0.1 OrthoFinder output from all 47 species
Ceric.38G050100.1 OTP84, Ceric.38G050100 not classified & original description: pacid=50580323... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000342.38 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.01 OrthoFinder output from all 47 species
Dac_g05104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05513 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g21739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g23960.1 LOC_Os05g23960 Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species
Len_g04246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04633 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04836 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g09168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18579 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18583 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g23506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44152 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54673 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08826 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33598 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03159 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11918 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13754 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02847 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60422 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65182 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05869 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g06149 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g07437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g21500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32617 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g44278 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g47779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57466 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g61853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008518 No alias not classified & original description: CDS=1-1671 0.03 OrthoFinder output from all 47 species
Sam_g02656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04185 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04440 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09909 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17180 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17487 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23982 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44142 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45045 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51828 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17765 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g27069 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g27339 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 203 251
IPR002885 Pentatricopeptide_repeat 510 555
IPR002885 Pentatricopeptide_repeat 581 605
IPR002885 Pentatricopeptide_repeat 105 133
IPR002885 Pentatricopeptide_repeat 307 336
IPR002885 Pentatricopeptide_repeat 409 435
IPR002885 Pentatricopeptide_repeat 279 300
No external refs found!