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  5. Aop_g39200

Aop_g39200


Description : transcriptional co-regulator *(OFP) & original description: none


Gene families : OG0000209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g39200
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Ala_g20318 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42861.t2 ATOFP6, OFP6,... transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G010500.1 Ceric.18G010500 transcriptional co-regulator *(OFP) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g01618 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25347 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03668 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g06350.1 OFP11, atofp11,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
LOC_Os12g06160.1 LOC_Os12g06160 transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
MA_61037g0010 ATOFP15, OFP15 transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Msp_g12657 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014147 ATOFP1, OFP1 transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019703 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021192 OFP2, ATOFP2 transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Solyc09g082080.1.1 OFP12, ATOFP12,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Spa_g17587 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019186_P001 Zm00001e019186 transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Zm00001e039400_P001 ATOFP13, OFP13,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Zm00001e041973_P001 ATOFP13, OFP13,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR006458 Ovate_C 422 471
No external refs found!