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  5. Aop_g39388

Aop_g39388


Description : not classified & original description: none


Gene families : OG0000027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g39388

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00214850 ARA12,... Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00017p00215540 evm_27.TU.AmTr_v1... Subtilisin-like protease SBT1.5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00017p00215590 ARA12,... Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00160190 SDD1,... Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00162250 evm_27.TU.AmTr_v1... Cucumisin OS=Cucumis melo 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00162360 evm_27.TU.AmTr_v1... Cucumisin OS=Cucumis melo 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00177600 SDD1,... Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00178060 SDD1,... Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00165p00065060 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
AMTR_s00165p00067080 evm_27.TU.AmTr_v1... Cucumisin OS=Cucumis melo 0.02 OrthoFinder output from all 47 species
AT4G34980 SLP2 subtilisin-like serine protease 2 0.03 OrthoFinder output from all 47 species
AT5G67360 ARA12 Subtilase family protein 0.02 OrthoFinder output from all 47 species
Adi_g110722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46577 XSP1 protease *(SBT4) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36839 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g37007 ARA12 protease *(SBT1) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g39171 ARA12 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g39172 ARA12 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g39173 XSP1 protease *(SBT4) & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g39174 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g26856 No alias protease *(SBT4) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g31415 XSP1 protease *(SBT4) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33047 SLP3 protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46307 XSP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51576 AIR3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009474001 No alias Subtilisin-like protease SBT1.9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01009968001 ATSBT5.2 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01016447001 No alias Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01024856001 No alias Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01024857001 No alias Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01037483001 No alias Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
Gb_30212 ARA12 Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_39169 ARA12 no description available(sp|o82777|sbt3_sollc : 599.0) 0.03 OrthoFinder output from all 47 species
LOC_Os01g64850.1 LOC_Os01g64850 protease (SBT1) 0.04 OrthoFinder output from all 47 species
LOC_Os02g17000.1 LOC_Os02g17000 Subtilisin-like protease SBT3.9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g17090.1 LOC_Os02g17090 Subtilisin-like protease SBT3.9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g40830.1 ARA12, LOC_Os03g40830 protease (SBT1) 0.03 OrthoFinder output from all 47 species
LOC_Os04g45960.1 SLP3, LOC_Os04g45960 protease (SBT2) 0.02 OrthoFinder output from all 47 species
LOC_Os04g47160.1 SDD1, LOC_Os04g47160 Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g48416.1 ATSBT1.3,... protease (SBT1) 0.02 OrthoFinder output from all 47 species
Len_g40519 XSP1 protease *(SBT4) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g49211 ARA12 protease *(SBT1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24926 ARA12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27391 SLP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27778 SDD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35849 XSP1 protease *(SBT4) & original description: none 0.03 OrthoFinder output from all 47 species
Smo236400 AIR3 Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo444992 AIR3 Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g087820.2.1 Solyc01g087820 protease (SBT1) 0.05 OrthoFinder output from all 47 species
Tin_g37839 XSP1 protease *(SBT4) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41207 ARA12 protease *(SBT1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007279_P001 SDD1, Zm00001e007279 Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e007367_P002 SLP3, Zm00001e007367 protease (SBT2) 0.03 OrthoFinder output from all 47 species
Zm00001e026991_P001 ARA12, Zm00001e026991 protease (SBT1) 0.02 OrthoFinder output from all 47 species
Zm00001e031394_P002 SLP2, Zm00001e031394 Subtilisin-like protease SBT1.6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR041469 Subtilisin-like_FN3 59 163
No external refs found!