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  5. Aop_g40176

Aop_g40176 (ORF158)


Aliases : ORF158

Description : not classified & original description: none


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g40176
Cluster HCCA: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
ATMG00860 ORF158 DNA/RNA polymerases superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g014337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g062208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g085112 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g17788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g61895 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene05953.t1 Aspi01Gene05953 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene06733.t1 TET8, Aspi01Gene06733 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aspi01Gene20354.t1 Aspi01Gene20354 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23614.t1 ORF158, Aspi01Gene23614 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29620.t1 Aspi01Gene29620 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene38644.t1 Aspi01Gene38644 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene40409.t1 Aspi01Gene40409 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene42825.t1 ORF158, Aspi01Gene42825 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49828.t1 Aspi01Gene49828 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g36635 ORF158 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g25557 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38149 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g40730 ORF158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g056575.1.1 Solyc01g056575 RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 OrthoFinder output from all 47 species
Tin_g29148 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041588 Integrase_H2C2 1399 1450
IPR041577 RT_RNaseH_2 1157 1255
IPR001584 Integrase_cat-core 1471 1563
IPR000477 RT_dom 931 1093
IPR005162 Retrotrans_gag_dom 127 220
No external refs found!