Aop_g41226 (AtRABA1f, RABA1f)

Aliases : AtRABA1f, RABA1f

Description : A-class RAB GTPase & original description: none

Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g41226
Cluster	HCCA: Cluster_281

Target	Alias	Description	ECC score	Gene Family Method
AT1G06400	ATRABA1A, ARA2,...	Ras-related small GTP-binding family protein	0.02	OrthoFinder output from all 47 species
AT1G09630	ATRABA2A,...	RAB GTPase 11C	0.03	OrthoFinder output from all 47 species
Adi_g049634	ATRABA2A,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os05g01480.1	ATRABA2A,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
LOC_Os05g44070.1	ATRABA1B, RAB11,...	A-class RAB GTPase	0.02	OrthoFinder output from all 47 species
LOC_Os08g41340.1	AtRABA5d,...	A-class RAB GTPase	0.04	OrthoFinder output from all 47 species
Len_g03672	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Len_g15896	ATRABA2A,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
MA_109703g0010	AtRABA1f, RABA1f	A-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Mp3g00730.1	ATRABA5C, ARA4,...	A-class RAB GTPase	0.02	OrthoFinder output from all 47 species
MpVg00760.1	AtRABA1f, RABA1f	No annotation	0.03	OrthoFinder output from all 47 species
Nbi_g04098	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g01090	AtRABA5a, RABA5a	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g00826	RABA2b,...	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g48613	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Smo146310	AtRABA1f, RABA1f	Vesicle trafficking.regulation of membrane tethering and...	0.02	OrthoFinder output from all 47 species
Solyc02g072180.3.1	ATHSGBP, RABA1d,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Solyc10g045550.2.1	ATRABA2A,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Solyc12g014080.2.1	AtRABA1f,...	A-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Spa_g20450	AtRABA5a, RABA5a	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g42040	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e037250_P001	ATHSGBP, RABA1d,...	A-class RAB GTPase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	14	174

External Links

No external refs found!

Aop_g41226 (AtRABA1f, RABA1f)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation