Lfl_g12828 (PAKRP1, KINESIN-12A)

Aliases : PAKRP1, KINESIN-12A

Description : Kinesin-12-type motor protein & original description: none

Gene families : OG0000122 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000122_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g12828
Cluster	HCCA: Cluster_99

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00147270	evm_27.TU.AmTr_v1...	Cytoskeleton.microtubular network.Kinesin...	0.02	OrthoFinder output from all 47 species
AMTR_s00055p00149080	PAKRP1L,...	Cytoskeleton.microtubular network.Kinesin...	0.03	OrthoFinder output from all 47 species
AMTR_s00169p00060710	POK2,...	Cytoskeleton.microtubular network.Kinesin...	0.02	OrthoFinder output from all 47 species
Ala_g25903	ZCF125	Kinesin-7-type motor protein & original description: none	0.02	OrthoFinder output from all 47 species
Als_g61668	PAK, ARK3	Kinesin-U-type motor protein & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene29055.t2	PAKRP1,...	Kinesin-12-type motor protein & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene51768.t1	Aspi01Gene51768	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0078.g038210	No alias	Kinesin-5-type motor protein & original description: CDS=574-3756	0.04	OrthoFinder output from all 47 species
Ceric.02G029400.1	POK2, Ceric.02G029400	Kinesin-12-type motor protein & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.34G019800.1	Ceric.34G019800	Kinesin-12-type motor protein & original description:...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000692.13	No alias	Cytoskeleton.microtubular network.Kinesin...	0.02	OrthoFinder output from all 47 species
Cre10.g447500	FRA1	Kinesin-like protein KIN-5C OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
LOC_Os05g02670.1	LOC_Os05g02670	motor protein (Kinesin-5)	0.02	OrthoFinder output from all 47 species
LOC_Os08g02380.1	LOC_Os08g02380	motor protein (Kinesin-1)	0.02	OrthoFinder output from all 47 species
LOC_Os11g35090.1	ZCF125, LOC_Os11g35090	motor protein (Kinesin-7)	0.02	OrthoFinder output from all 47 species
Len_g57483	PAKRP1, KINESIN-12A	Kinesin-12-type motor protein & original description: none	0.03	OrthoFinder output from all 47 species
MA_653619g0010	No alias	Kinesin-like protein KIN-5D OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_7040g0020	PAKRP1L, KINESIN-12B	Kinesin-like protein KIN-12B OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Smo403524	No alias	No description available	0.04	OrthoFinder output from all 47 species
Solyc07g065210.4.1	Solyc07g065210	motor protein (Kinesin-12)	0.03	OrthoFinder output from all 47 species
Spa_g45073	POK2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e005691_P001	Zm00001e005691	phragmoplast integrity regulator (Kinesin-12). motor...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	None	Extended
MF	GO:0003777	microtubule motor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007018	microtubule-based movement	IEA	Interproscan
MF	GO:0008017	microtubule binding	IEA	Interproscan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015631	tubulin binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006432	phenylalanyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001752	Kinesin_motor_dom	156	488

External Links

No external refs found!

Lfl_g12828 (PAKRP1, KINESIN-12A)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation