Lfl_g12872 (CPN60B, LEN1)

Aliases : CPN60B, LEN1

Description : chaperone *(Hsp60) & original description: none

Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g12872

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00062p00185880	CH-CPN60A,...	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
AT2G28000	CH-CPN60A, CPN60A, SLP	chaperonin-60alpha	0.02	OrthoFinder output from all 47 species
Als_g10775	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Cre17.g741450	CPN60B, LEN1	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Dac_g15356	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g07618	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01025490001	No alias	External stimuli response.temperature.Hsp...	0.04	OrthoFinder output from all 47 species
GSVIVT01031526001	CH-CPN60A, CPN60A, SLP	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Nbi_g09829	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g06617	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c24_12180V3.1	CH-CPN60A,...	chaperonin-60alpha	0.01	OrthoFinder output from all 47 species
Smo168153	CPN60B, LEN1	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Solyc03g120850.4.1	CPN60B, LEN1,...	subunit beta of Cpn60 chaperonin complex. component...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003873	6-phosphofructo-2-kinase activity	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006000	fructose metabolic process	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
MF	GO:0008443	phosphofructokinase activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0019200	carbohydrate kinase activity	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	90	593

External Links

No external refs found!

Lfl_g12872 (CPN60B, LEN1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation