Lfl_g12946 (COB)

Aliases : COB

Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly & original description: none

Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g12946

Target	Alias	Description	ECC score	Gene Family Method
AT5G49270	COBL9, MRH4, SHV2, DER9	COBRA-like extracellular glycosyl-phosphatidyl...	0.02	OrthoFinder output from all 47 species
Aev_g17419	COB	regulatory protein *(COB) of cellulose-hemicellulose...	0.02	OrthoFinder output from all 47 species
Als_g15085	COBL2	regulatory protein *(COB) of cellulose-hemicellulose...	0.02	OrthoFinder output from all 47 species
Aob_g05189	COBL10	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Aob_g19185	COB	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Aspi01Gene04671.t1	COBL1, Aspi01Gene04671	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Aspi01Gene04673.t1	COBL1, Aspi01Gene04673	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Aspi01Gene04674.t1	COBL1, Aspi01Gene04674	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Dac_g00727	COB	regulatory protein *(COB) of cellulose-hemicellulose...	0.02	OrthoFinder output from all 47 species
Dac_g02257	COBL2	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
LOC_Os07g41320.1	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species
Lfl_g06176	SEB1, COBL7, ATSEB1	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Nbi_g04364	SEB1, COBL7, ATSEB1	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Ore_g34445	COB	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Solyc02g089130.4.1	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species
Solyc03g070440.4.1	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.02	OrthoFinder output from all 47 species
Zm00001e035505_P001	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.02	OrthoFinder output from all 47 species
Zm00001e038043_P001	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010215	cellulose microfibril organization	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0030198	extracellular matrix organization	None	Extended
BP	GO:0043062	extracellular structure organization	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006918	COBRA_pln	79	242

External Links

No external refs found!

Lfl_g12946 (COB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation