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  5. Lfl_g12997

Lfl_g12997 (EST3, MRP4, ATMRP4, ABCC4)


Aliases : EST3, MRP4, ATMRP4, ABCC4

Description : subfamily ABCC transporter & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g12997
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00226270 MRP6, ATMRP6,... ABC transporter C family member 8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G59140 ATMRP14, ABCC10, MRP14 multidrug resistance-associated protein 14 0.02 OrthoFinder output from all 47 species
AT3G60160 MRP9, ABCC9, ATMRP9 multidrug resistance-associated protein 9 0.03 OrthoFinder output from all 47 species
AT3G60970 MRP15, ABCC15, ATMRP15 multidrug resistance-associated protein 15 0.03 OrthoFinder output from all 47 species
Ala_g25843 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07445 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09219 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31097 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06591 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07486 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07587 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16291 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17215 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17568 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38812 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G027800.1 EST3, MRP4,... subfamily ABCC transporter & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z013100.1 MRP6, ATMRP6,... subfamily ABCC transporter & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.21G016300.1 ATABCC5, MRP5,... subfamily ABCC transporter & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01018403001 MRP9, ABCC9, ATMRP9 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01019471001 ATMRP14, ABCC10, MRP14 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01019476001 ATMRP14, ABCC10, MRP14 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
GSVIVT01037789001 ABCC3, ATMRP3, MRP3 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_05522 MRP9, ABCC9, ATMRP9 subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
LOC_Os04g13220.1 EST3, MRP4,... subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
LOC_Os11g05700.1 ATMRP14, ABCC10,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
MA_380601g0010 MRP6, ATMRP6, ABCC8 ABC transporter C family member 8 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_491683g0020 MRP15, ABCC15, ATMRP15 ABC transporter C family member 8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp4g11790.1 MRP11, ABCC13, ATMRP11 subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
Mp4g15590.1 ATMRP14, ABCC10, MRP14 subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Nbi_g22300 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24428 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15840 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15997 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014950 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: CDS=1-4785 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024424 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: CDS=1-4845 0.02 OrthoFinder output from all 47 species
Smo409191 MRP6, ATMRP6, ABCC8 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc11g065720.2.1 ATMRP14, ABCC10,... subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Solyc12g036120.1.1 ABCC12, MRP13,... ABC transporter C family member 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc12g044820.3.1 MRP6, ATMRP6,... subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Spa_g20006 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25978 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50671 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1296 1444
IPR011527 ABC1_TM_dom 995 1223
IPR011527 ABC1_TM_dom 319 587
IPR003439 ABC_transporter-like_ATP-bd 651 784
No external refs found!