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  5. Aop_g47989

Aop_g47989


Description : not classified & original description: none


Gene families : OG0000906 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000906_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g47989

Target Alias Description ECC score Gene Family Method Actions
Adi_g113421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38098 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aop_g11567 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aop_g32909 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Ceric.12G096700.1 Ceric.12G096700 component *(eS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.79 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Cre06.g272800 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Dac_g03069 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Dac_g14336 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g29489 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01037763001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Lfl_g05239 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Mp2g16300.1 No alias component RPS8 of SSU proteome 0.01 OrthoFinder output from all 47 species
Msp_g01868 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Msp_g18199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03638 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Pp3c13_20020V3.1 Pp3c13_20020 Ribosomal protein S8e family protein 0.01 OrthoFinder output from all 47 species
Pp3c4_11370V3.1 Pp3c4_11370 Ribosomal protein S8e family protein 0.01 OrthoFinder output from all 47 species
Ppi_g14976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0161.g023905 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g06814 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.01 OrthoFinder output from all 47 species
Sam_g15855 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g19629 No alias component *(eS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Solyc06g083180.4.1 Solyc06g083180 component RPS8 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc07g065170.3.1 Solyc07g065170 component RPS8 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022309 Ribosomal_S8e/biogenesis_NSA2 1 106
No external refs found!