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  5. Aop_g54657

Aop_g54657


Description : not classified & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g54657

Target Alias Description ECC score Gene Family Method Actions
AT1G50640 ATERF3, ERF3 ethylene responsive element binding factor 3 0.04 OrthoFinder output from all 47 species
AT3G60490 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g001941 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g14106 DEAR2 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aob_g31985 ORA47 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32316 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Aop_g62836 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene53867.t1 DEAR4, RAP2.10,... subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0016.g014331 ATERF13, ERF13, EREBP not classified & original description: CDS=134-1000 0.02 OrthoFinder output from all 47 species
Cba_g03183 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g11691 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.06 OrthoFinder output from all 47 species
Dac_g15023 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g40468 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14006 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01028315001 ERF1, ATERF1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
MA_10431882g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_15251g0010 tny transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_54341g0010 WIN1, SHN1 transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
MA_5805979g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.03 OrthoFinder output from all 47 species
Mp2g11080.1 HRE2 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Msp_g35612 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03495 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ore_g38654 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006108 No alias not classified & original description: CDS=1-567 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021048 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc03g093560.1.1 Solyc03g093560 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc09g089910.1.1 Solyc09g089910 transcription factor (ERF). transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Spa_g14734 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21487 RAP2.6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22026 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g39331 LEP not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000609_P001 RAP2.2, Zm00001e000609 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e023686_P001 Zm00001e023686 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 39 86
No external refs found!